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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931092.1_cds_XP_016477998.1_69674
CDS Infomation

[gene=LOC107799403] [db_xref=GeneID:107799403] [protein=probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X3] [protein_id=XP_016477998.1] [location=join(15653..16568,16900..18734,18823..18882,19025..19045)] [gbkey=CDS]
Sequence

ATGGGCAGAATTAGTGGCAATCTTCTCTTTGCTCTTGCAGTTATCTTTCTGCTTCATGAT
CATACTTCAATTGCTACTGTTCCCAGTATTAGCACTGATGTAGCTGCTCTTCTTGCTTTG
AAATCTCACATTTCTTTTTATCCTAACAATATATTAGCAAGAAACTGGTCTTCTTCCACC
CCAGTTTGCAGCTGGATTGGAATCACTTGCAGCTCCAGCCATAATCGAGTCACAGCTTTA
AACATTTCTAGCATGCAACTTCATGGTACCATTCCTCCACATCTTGGAAACCTCTCATTT
CTTGTTTCCCTCGACATCAGTAACAACACTTTTTATATAGAATTGCCAGAGGAATTGGCT
CATTTGCAGAGGTTGAAATTGATTGATGTCACGAGCAATAACTTCACTGGTGTCATTCCA
TCATTTTTAAGGTTGTTACCAGACCTTCGCATTGTGCGCCTTTCGAGCAACCAATTTTCG
GGAGAAATACCATCTTCCCTTTCCAATCTAACAAAGCTGGAAGTATTGAACATACAGGGA
AATTATCTGGAAGGAGAGATCCCTCAAGAACTTGGTCATCTTCGTTACATGACTATTTTA
GACCTGCAATACAACTGGCTTACTGGCTCTATACCACCATCAATCTTTAACATTACGACA
ATGCAAGTCATTGCTCTTACTAGTAACAATCTTATTGGTAAGCTTCCAACAACTATATGT
GACCATCTTCCAAACTTGGAAATGCTTTACCTTTCAACAAACTACCTAGAGGGTGTCATT
CCACCAAACATCGGAAAATGCAGAAAGCTTCAATTCTTGTCACTGTCTGTCAATGAGTTC
ATTGGAACTATACCAAGAGAGCTAGCTAACTTAACAGCACTTAGAATATTAGAACTTCGA
GAACAACACTTGGAAGGAGAGATACCAGTGGAGCTAGGTAACCTTAGGAAACTCCGGGCA
CTGTTATTATACCAAAATATGTTTACTGGTACCGTCCCTTCAAGCATTTTCAATATGTCG
GAACTGCAGCACCTAGGACTTGGAGGAAATGAGCTTACTGGTACTTTACCTTCAGATTTA
GGCCGTGGAATGCCCAGCCTAGAAGAATTTAGTTGTGCACAAAATCACTTTAGTGGTTTT
GTCTCTGCCACTATCTCAAATTCTTCAAGACTCATAGGTCTTGAATTCTCATTCAACAGT
TTCACAGGTCCAATTCCTAAATCACTTGGTAACTTAAAATACCTTGAGTTTCTCAACTTG
TGGGGGAATAATTTTTCCAGCGATTCATCAATGAGCTTCCTGACATCTTTGACAGACTGT
AGGAATCTAAAAGTACTCTGGTTTGCTGATAATCCGTTGGGTGGTGTTTTTCCATCATCT
GTTGGAAATTTCTCTAACTCTCTCCAAAGTTTTGTAGGACAGGATTGTCAACTGAAGGGC
GTCATTCCTAAAGAAATTGGTAATCTTACTGGAGTGACAAAGATGAGTCTGTCTAACAAT
GAGTTGACTGGACATATCCCAAATACTATCCAAGGCATGCTGAATCTTCAAGAACTTTAC
CTACAAAACAACAAGTTAGAAGGAACCATACCAGATGTTATCTGCAATTTAAAGAAACTT
GGTGCATTAAACTTGTCAAGAAACCAGTTTGCTGGTTCTGTGCCACCATGCTTAGGAAAA
GTAACCAATTTGAGGAATATTAATCTAGCTTACAATAGACTGAACTCGAGCTTACCTGCA
GCCTTAGGAGACCTTCATGATCTCATAGAATTCAATGTTTCATCCAATTTATTAGGTGGG
CAAATTCCTATGGAGATTGGAAATTTAAAAGCGGCAACACTTATTGATCTGTCAAAAAAT
GATTTTTTTGGGAAGATTCCTATCACTCTAAGGAGTCTGGATAAATTGACTAAACTTTCG
CTAGCACATAATAGATTAGATGGACCTATTCCAGATTCATTTGGAAAAATGTTGGCTTTG
GAATTCTTGGATTTGAGCTATAACAATCTTAGCGGTGAAATTCCAAAGTCACTAGAAGCT
CTTGTGTATCTCAAATATTTGAACATCTCATTTAATGAACTTAGTGGAGAGATTCCCGCT
GGTGGTCCTTTTACAAATGCCACATATCAATCTTTCTTGTCCAATGATGCACTATGTGGT
GATTCCAAGTTTCATGTGTCACCATGCGTCATAAAATCTACCAAGAAAAAAAAGGCAATC
TTGGCTTTGTACACCCTTTTGGGAGTGGGCCTGCTGTTTCTTGCATTAGCCTTCGCATAT
GTATATTTAAGAATGCGAATGCTAAAGAAGAATGCAGGTCAAGCAGAAGTGTTCCCAGTA
AAAGGGCATGAAAGAATTTCCTATTATGAACTTGAACAAGCAACAGAAGGATTCAATGAA
AGCAACTTACTTGGTAATGGGAGTTTCAGCACGGTTTACAAAGGAACACTTAAGGATGGA
ACCCCTTTAGCAGCAAAGGTATTCAATGTGCAATTGGAGGGTGCATTCAAAAGTTTTGAT
ACTGAATGTGAGATGCTACGCAACCTTCGCCACAGAAATCTGACCAAAATCATCACCAGC
TGCTCCAACCTTGATTTCAAGGCCTTAGTGTTGGAATACATGCCCAATGGGACACTTGAT
AAATGGTTATACTCTCACAACTTGTTCTTGAACTTATTGCAGAGATTAGATATAATAATA
GATGTTGCATCTGCAATGGACTATCTCCATAATGGCTTTTTAGCACCAATGGTGCAGGGG
AGGCTTTTATTCAAACAGGGACGATTGCAACCCTTGGATATATTGCTCCAGAGTATGGCC
AACATGGAATAG

Peptide Sequence

PEP ID

XP_016477998.1
PEP Infomation

PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X3 [Nicotiana tabacum]
Sequence

MGRISGNLLFALAVIFLLHDHTSIATVPSISTDVAALLALKSHISFYPNNILARNWSSST
PVCSWIGITCSSSHNRVTALNISSMQLHGTIPPHLGNLSFLVSLDISNNTFYIELPEELA
HLQRLKLIDVTSNNFTGVIPSFLRLLPDLRIVRLSSNQFSGEIPSSLSNLTKLEVLNIQG
NYLEGEIPQELGHLRYMTILDLQYNWLTGSIPPSIFNITTMQVIALTSNNLIGKLPTTIC
DHLPNLEMLYLSTNYLEGVIPPNIGKCRKLQFLSLSVNEFIGTIPRELANLTALRILELR
EQHLEGEIPVELGNLRKLRALLLYQNMFTGTVPSSIFNMSELQHLGLGGNELTGTLPSDL
GRGMPSLEEFSCAQNHFSGFVSATISNSSRLIGLEFSFNSFTGPIPKSLGNLKYLEFLNL
WGNNFSSDSSMSFLTSLTDCRNLKVLWFADNPLGGVFPSSVGNFSNSLQSFVGQDCQLKG
VIPKEIGNLTGVTKMSLSNNELTGHIPNTIQGMLNLQELYLQNNKLEGTIPDVICNLKKL
GALNLSRNQFAGSVPPCLGKVTNLRNINLAYNRLNSSLPAALGDLHDLIEFNVSSNLLGG
QIPMEIGNLKAATLIDLSKNDFFGKIPITLRSLDKLTKLSLAHNRLDGPIPDSFGKMLAL
EFLDLSYNNLSGEIPKSLEALVYLKYLNISFNELSGEIPAGGPFTNATYQSFLSNDALCG
DSKFHVSPCVIKSTKKKKAILALYTLLGVGLLFLALAFAYVYLRMRMLKKNAGQAEVFPV
KGHERISYYELEQATEGFNESNLLGNGSFSTVYKGTLKDGTPLAAKVFNVQLEGAFKSFD
TECEMLRNLRHRNLTKIITSCSNLDFKALVLEYMPNGTLDKWLYSHNLFLNLLQRLDIII
DVASAMDYLHNGFLAPMVQGRLLFKQGRLQPLDILLQSMANME

Transcript Sequence

Gene sequence data has not been registered.